rs32662525 SNP Detail

Summary

• ID
  rs32662525
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150143621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTG GTGAGTGCGC ACAACTCTCT
  K
  TTTTCCCACA CACTGTCTCT GGGAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46711173	NES11008291	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	T	T	G	G	T	G
ss148046437	ENSMUSSNP3290036	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32662525					SNP	G	T	T	T	T	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711173	NES11008291	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150143621 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Rr398877	regulatory region 398877	734 bp upstream
Rr605159	regulatory region 605159	1398 bp distal
Rr605160	regulatory region 605160	1092 bp distal
Rr605161	regulatory region 605161	731 bp proximal