rs32661728 SNP Detail

Summary

• ID
  rs32661728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150153515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTTGCAA AAGGACTCTT
  CCTGCTGGGC TTGCTGGCTG TTTACACTTC TTGTGGAGGG CTGGGGACGG TCACAAGACC
  CTCACCTGAA TGTCCAGCTG CCCCCTTCCA CCTGCTCCAT GCAACTCTGC CTGAAGCGCA
  CGTGGCCTCA GAGAGGGGCT GAGCTCTGTA GTCTGGGTAA GCCCAGGCAG ACCGCTGCTG
  Y
  TGAGTGAAGG CTTTCTGCGT TTGGGCTGTT GGAGATCCAG GGTATACATC AAGGGTCTGC
  TGTGATCTGC TTCTTACAGA CAGACAGACA CACGGGTTCA AACAGAAAGG TAGCCGAGGA
  CACAGGACAT AGCAGGGGTG GAGTGCAGAA GTCTCCGGCT GGTGCCCCAG GGAATGGGCC
  CAGGGCTCAG AGCTGCCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711359	NES11007966	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32661728					SNP	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711359	NES11007966	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150153515 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Gm37795	predicted gene, 37795	within coordinates
Mir34a	microRNA 34a	503 bp downstream
Rr605164	regulatory region 605164	936 bp proximal