rs32660984 SNP Detail

Summary

• ID
  rs32660984
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150112588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAA TATCACCCTC ATATAGATAA
  R
  GCAGGAGGGC CCCAGAGTTG AAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
ss45719182	mCV24999743	ABI	CRAMUS_MOUSE	f	SNP	G	G	A		G
ss46710801	NES11013237	PERLEGEN	MM_PANEL2	f	SNP	G		A	G		G	A	A	G		G	G
ss148045625	ENSMUSSNP3352223	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss321427680	CHEV_4_149402240	CHEVERUD	SCREENING_POP	f	SNP										G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
rs32660984					SNP	G	G	A	G	G	G	A	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46710801	NES11013237	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150112588 () rs orientation: forward

Symbol	Name	Function Class
Gm70249	predicted gene, 70249	1686 bp upstream
Rr605147	regulatory region 605147	1293 bp proximal
Rr605148	regulatory region 605148	1697 bp proximal
Tssr40361	transcription start site region 40361	1708 bp upstream