rs32660796 SNP Detail

Summary

• ID
  rs32660796
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150152732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAAGAGCA GACAGTGCTC
  TTAACCGCTG AGCCATCTCT TCAGCTTCCA GTTTTTACTT CAGTCTCACC ATATTGCCCA
  GACTGGTCTT GAACTCCTAA ACTCAAAGGA ACCTCCTGAC TCAGCCTCCT TGTGGAAGCC
  GGAAGGCATT CCTGAAGCCC TCCTGGTGGC GCTGTCCCTC CAGCTGAATC CCGACTAGTG
  Y
  GCCCTTCGTG GGTGCTGGAT GGGGAGGCAC TGCTGTACCC TGCTGCTTCC CTCCTGTGCT
  AGCGTGCTGG CTTCCAAGTG CTGGAGGAGT GTGTCATACC TCGGTAGGGT CCACTACACA
  TCTTTCTCCC GCAGCCTCTC CATCTTCCTG TGACTGCGGG CGCCTCAGCC TGGGCTGGCC
  AGCTGTGAGT AATTCTTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711344	NES11007957	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32660796					SNP	C	C	C	C	C	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711344	NES11007957	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150152732 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Gm37795	predicted gene, 37795	264 bp upstream
Mir34a	microRNA 34a	179 bp upstream
Rr605164	regulatory region 605164	1719 bp proximal