rs32658834 SNP Detail

Summary

• ID
  rs32658834
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150145977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGGGACA GATGGGCCCT
  GTGTGCTCAC AGCAGAGCTT AGGGAAGAGG CCCGGCACAG CCTCTGGGCT CCTAAAGGCC
  ACTGCCCATG CCTTTCCACG TCTCTGGACA GCTCTAGGTT CTGTGGATTC CAGTGTCTGT
  GGTAGACGGA GCCAGCCCAT GGATGGACAG TGGAACTGCT TCCTCCAAAG AGCTTGCCCA
  Y
  AGAGATAGAA CAGCCCTAAG ATATGGCCGT GGCCAGGCTA ACTTCCAGAC CAGGCCCCAC
  CCAGCCTCAC CCGCATGACT GACTATACAG GCTAGCGTGC TCAGGTGTGG GACTGGGGAT
  TTTCCTCCCT CTCCCCTCTT CCCCTCTCCT CTTTGTTCTT CCTTTACTCC CTCTGGCTTT
  TGGGTCAGCA TCCAGATGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46711227	NES11008246	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32658834					SNP	C	C	C	C	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711227	NES11008246	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150145977 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Rr398877	regulatory region 398877	1321 bp downstream
Rr605161	regulatory region 605161	330 bp distal
Rr605162	regulatory region 605162	within coordinates
Rr605163	regulatory region 605163	364 bp proximal