rs32658568 SNP Detail

Summary

• ID
  rs32658568
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135154658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTT TTAGCTGATT ATATTAATTA
  W
  ATTGCTGTGC CTGAACCTTT GGGTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45677111	mCV25168367	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss147546799	ENSMUSSNP6284983	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
ss321352195	CHEV_4_134983262	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32658568					SNP	A	T	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135154658 () rs orientation: forward

Symbol	Name	Function Class
Gm69999	predicted gene, 69999	within coordinates
Rcan3	regulator of calcineurin 3	Intron
Rr367746	regulatory region 367746	501 bp downstream
Rr602028	regulatory region 602028	1374 bp distal
Rr602029	regulatory region 602029	167 bp distal
Tssr43990	transcription start site region 43990	1365 bp downstream