rs32655421 SNP Detail

Summary

• ID
  rs32655421
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135667388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACATTGCAGG GAATGGGGAG GGGTCGAGGG GGAATTTTAA CAAAGAACAA AAAAGTGGGC
  ATCTGCTCAC ATGAGGTCCG AAGTCAGGCT CCAGGCGGCG GGCACTCTGC ATCTTATAGA
  TCTATGCGGA ACATAGATCC TCCTTGACAG CCTTGGGGTG TCAGGCCGGG CTCAGGCGTA
  ACTCATGTCC TTGGATGGCT TGGGAGTCAG GAAGAGACAG GGAAGAGGGG ACTATAATTT
  AGCTTTTACA GCCTCAGGTG CCAGGAAGGG AATAGGGAGG AGGGAGTGAT AACCAGCTCC
  Y
  AGCATGAGGC CATTTGGCCT GTCAGGGAGA TTGTGAAGGG CTCGATTTCT CACGGGATGG
  TCTCTGACAC AGAGATACCA ATGAAAGAAG GCGATGCTGC CTTGCCTTAA AAAAAAAAAA
  AAAAAAAAAA AAAGATGGAA GTAAATTTGT ATGCCAAATT ATTTCTACCA CAAGCATGTG
  ATAGGTTTCT TTCCCTAACT TAGGTTACAG CTTTATACTC ATTTTCTGGT TTCCTTGTTT
  GTTTGTTTTT TTTTTTTTTT AATTTAAAAA AAATTTTTTT TTATTTAGGG AGAAAAAAAA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45676155	mCV22566156	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss147554440	ENSMUSSNP5835881	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32655421					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135667388 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	mRNA-UTR
Rr602205	regulatory region 602205	941 bp distal
Rr602206	regulatory region 602206	907 bp distal
Rr602207	regulatory region 602207	1146 bp proximal
Rr602208	regulatory region 602208	1895 bp proximal