rs32649510 SNP Detail

Summary

• ID
  rs32649510
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150060434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTACTCA CAGTGGTTGG
  TTTTTAAAAA AAACAAAAAA CAACAAAACA AAACAACAAA AAAAAACCCC AGGGGGTCTC
  ATCTACCTTA GGTTGGCTTG ATATTAGCTG AAGACCTTGA ACTCCCACGT GCTGCAATGA
  CAGGTGTGTG CCACCGTTCC CTGTTTATGA GACACTGGGA ATGCAACCCA GGGCTTTGTG
  S
  ACATGAGGCA TGTGCGCCAT CAGTTGAGCT ATAATCCCAT AATGCATCAT AACTGTTGGC
  ATTTCGTCTA GGCTCCGCCC CACAGTTACC TAGCAACAGC CAGGCATGCC TGACTCACTG
  TAAAAGGGGC TGCTTGTCCC CTCCTCTCTC TCTTGCTCTC TTCTCTTCTC TTCTCTTCTC
  TTCTCTTCTC TTCTCTTCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46710150	NES11013515	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32649510					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46710150	NES11013515	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150060434 () rs orientation: forward

Symbol	Name	Function Class
Gm69401	predicted gene, 69401	within coordinates
Rr605129	regulatory region 605129	1805 bp proximal
Tssr44701	transcription start site region 44701	988 bp upstream
Tssr44702	transcription start site region 44702	516 bp downstream
Tssr44703	transcription start site region 44703	780 bp downstream