CACAGTGGTT GGTTTTTAAA AAAAACAAAA AACAACAAAA CAAAACAACA AAAAAAAACC CCAGGGGGTC TCATCTACCT TAGGTTGGCT TGATATTAGC Y GAAGACCTTG AACTCCCACG TGCTGCAATG ACAGGTGTGT GCCACCGTTC CCTGTTTATG AGACACTGGG AATGCAACCC AGGGCTTTGT GGACATGAGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46710147 | NES11013514 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32649507 | SNP | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46710147 | NES11013514 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:150060342 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm69401 | predicted gene, 69401 | within coordinates | ||||||
Rr605129 | regulatory region 605129 | 1897 bp proximal | ||||||
Tssr44701 | transcription start site region 44701 | 896 bp upstream | ||||||
Tssr44702 | transcription start site region 44702 | 608 bp downstream | ||||||
Tssr44703 | transcription start site region 44703 | 872 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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