rs32648873 SNP Detail

Summary

• ID
  rs32648873
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58993971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA CATGTGAAGG AGTGTTTTCC
  Y
  GAAGCAGACA CAAGTGAAAG GATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45675650	mCV23111124	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146398624	ENSMUSSNP45939	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321139880	CHEV_4_59006843	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32648873					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58993971 () rs orientation: forward

Symbol	Name	Function Class
Dnajc25	DnaJ heat shock protein family (Hsp40) member C25	1244 bp upstream
Gm68783	predicted gene, 68783	within coordinates
Rr592963	regulatory region 592963	1440 bp distal
Rr592964	regulatory region 592964	1008 bp proximal
Rr592965	regulatory region 592965	1154 bp proximal
Tssr37405	transcription start site region 37405	338 bp upstream