rs32648821 SNP Detail

Summary

• ID
  rs32648821
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81815566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGTAACC CATTCAAAAA
  AAGAACACAA ATGGTATGCA CCCACTGATA AGTGGATATT AGCCCAGAAA CTTCAAATAC
  TCAAGATACA ATTGAAAAAT ACTCACAGAC CACATAAAAC TCAAAAAGAA AGAATACCAA
  AGTGTGGAAG CTTCAGTCCT TCTTAGAAGG GGAAACAAAA TACTCACAGG AGAAAATATG
  S
  TGACAAAGTG TGGAGTAGAG ATTGAAAGAA AGGCAGTCCA TTGACTGTCC CACCTGGGGA
  TCCATCCCAC CAAACCCAGA TACTATTGTG GATGCCAAGA AGTGCTTGCT GATAGAAGCC
  TGATATAGCT GTCTACTGAA AGGCTGTACT TTCCTGGCAA GTACTGAGGT GGATGCTTGC
  AGCCAGCCAT TGGACTGAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46709650	NES10760542	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32648821					SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46709650	NES10760542	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81815566 () rs orientation: forward

Symbol	Name	Function Class
Gm9989	predicted gene 9989	within coordinates
Rr375244	regulatory region 375244	1601 bp upstream
Rr578719	regulatory region 578719	1836 bp proximal