rs32648415 SNP Detail

Summary

• ID
  rs32648415
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81818826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACAAATTC TGATGCCTCC
  ATTCTATCTT GGAACTGCTT TCATGATACA GTATTTGATT AATGGCTAAC ACTTACTAGA
  ATGGAGCCAG TCTCAGCAAG TGCTTCAAAT GTGCTTTTAG GATATGTATA CTTCAAAAAA
  ATTAAAAAAA GTAAGAATGT GACTTACTAT TTCATTCTCA CCAATGAGGG ACCTTGAGGT
  W
  AATATTAATG CATCTTATTT ATAATATTTT GCCAATATAC ATTATTATTG CTCCATTGAA
  AAGTAATGGA AACAAAGAAG AGATTTGAGA ATAGTCACAG GTTCACAGCT CTGGCAAGTG
  ATGAATGCAG ACTTGAAAAC CATCACCAGC CTATTGACTA TGAAACCCAT ATTTTTATCC
  CTTAAGCCAT TCAAGATTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46709740	NES10760612	PERLEGEN	MM_PANEL2	f	SNP	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32648415					SNP	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46709740	NES10760612	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81818826 () rs orientation: forward

Symbol	Name	Function Class
Gm9989	predicted gene 9989	within coordinates
Rr375244	regulatory region 375244	686 bp downstream
Rr578719	regulatory region 578719	436 bp distal