rs32644788 SNP Detail

Summary

• ID
  rs32644788
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149960123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTG AGTCTGGTGT TGAAGACAGA
  Y
  GGCAGCCTTT CATTTCCTCA GTTAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss46708779	NES11001693	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	T	T	C		T	T
ss148042281	ENSMUSSNP7209303	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss321427087	CHEV_4_149249775	CHEVERUD	SCREENING_POP	f	SNP										T			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs32644788					SNP	C	C	C	T	C	C	T	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46708779	NES11001693	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149960123 () rs orientation: forward

Symbol	Name	Function Class
Rr367784	regulatory region 367784	641 bp upstream
Rr605091	regulatory region 605091	1319 bp distal
Rr605092	regulatory region 605092	1740 bp proximal