rs32642762 SNP Detail

Summary

• ID
  rs32642762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189406763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGCGGTAG GACTACAGAC ACATGCAACC ATTACCAGCT
  ATGTTGAATT ACTATGTGTA CATATGTGAT GGGAGCGCGC AACACAAGCA AACAGGTCAG
  R
  GAACAGCTTC TGGGAGGGAG TCAGTTCTCT CCTACAAGGG CTCCAAGGAC TAAACTCAGG
  CTGTCAGTTT CTGTAGCAGC TACTTTTACC CACTGAGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45173640	mCV27560405	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss146488443	ENSMUSSNP5199118	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32642762					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189406763 () rs orientation: forward

Symbol	Name	Function Class
Cenpf	centromere protein F	Intron
Gm70084	predicted gene, 70084	within coordinates
Rr425819	regulatory region 425819	871 bp proximal
Rr425820	regulatory region 425820	955 bp proximal
Rr425821	regulatory region 425821	1127 bp proximal