rs32639704 SNP Detail

Summary

• ID
  rs32639704
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149223231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAC ATGGTGGTTC ACACCTGTCT
  R
  TGATTACTGT TTCCAGGAGT CAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45673851	mCV24953430	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss148028594	ENSMUSSNP4452903	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321425014	CHEV_4_148512883	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32639704					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149223231 () rs orientation: forward

Symbol	Name	Function Class
Cenps	centromere protein S	1174 bp upstream
Cpgi15320	CpG island 15320	953 bp distal
Rr398863	regulatory region 398863	969 bp downstream
Rr604839	regulatory region 604839	1216 bp distal
Rr604840	regulatory region 604840	731 bp distal
Rr604841	regulatory region 604841	1118 bp distal
Tssr44623	transcription start site region 44623	1179 bp upstream
Tssr44624	transcription start site region 44624	1149 bp upstream