rs32638452 SNP Detail

Summary

• ID
  rs32638452
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149929183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA GACCTGATTC TCCAAAGGCC
  W
  CTGAGGTTTA TACATGTGGG TTTAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J
ss46708305	NES11003892	PERLEGEN	MM_PANEL2	f	SNP	T	T	A	A	A		T
ss321426948	CHEV_4_149218835	CHEVERUD	SCREENING_POP	f	SNP						T		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J
rs32638452					SNP	T	T	A	A	A	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46708305	NES11003892	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149929183 () rs orientation: forward

Symbol	Name	Function Class
Gm54270	predicted gene, 54270	889 bp downstream
Rr605077	regulatory region 605077	614 bp distal
Rr605078	regulatory region 605078	303 bp proximal