rs32637839 SNP Detail

Summary

• ID
  rs32637839
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129189465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTCTGGG GGTTGAGCCC
  AGGGCTTCAC ACAGGCTAGT CAAACAATAA ATAGCTTTAC TCATAGTCCT CTTTAGACTT
  GAGACAGGGT CTAAGTTGTC TAGCCTAGTC TTGAACTCAC CCAGTAGCTC GGGCAGGCCC
  TGAGTTTGAG ATCTTTCTGC TTCAGCCTCC CATGTAGCTG GGATTACAGA CCTATGCTAC
  Y
  TGGGTAAAAT GGGCTGCCAT ACCTGGCTTG GATTCTTATA TTCTTTTTTT TATAGACAAT
  GAACTGGAGG CTCAGCGCAG TCCTTTGAGG TTGGGCCTGA CCAGCCCTAG GTGTTTCTGT
  GCTTCATCTT CAAGTCTAAC TGACCTGTGA CTCGTGCTTG GCTATAGAGA GGGTTAGAAC
  GGCCCAGCAC AGGAGCTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45673560	mCV23068911	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss147437948	ENSMUSSNP5091400	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32637839					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129189465 () rs orientation: forward

Symbol	Name	Function Class
Rr600195	regulatory region 600195	60 bp distal
Rr600196	regulatory region 600196	233 bp proximal
Sync	syncoilin	Intron