rs32630297 SNP Detail

Summary

• ID
  rs32630297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150653034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTC AGTGCAGCCT GATCCTCACT
  R
  CCCTCTAAAA GTCATCTACA AGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45672660	mCV23182751	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148055025	ENSMUSSNP4301329	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32630297					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150653034 () rs orientation: forward

Symbol	Name	Function Class
Gm13091	predicted gene 13091	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605335	regulatory region 605335	1942 bp distal
Rr605336	regulatory region 605336	44 bp distal
Rr605337	regulatory region 605337	within coordinates
Rr605338	regulatory region 605338	1658 bp proximal
Tssr40416	transcription start site region 40416	1993 bp downstream
Tssr40417	transcription start site region 40417	239 bp upstream
Tssr40418	transcription start site region 40418	640 bp upstream
Tssr40419	transcription start site region 40419	672 bp upstream
Tssr40420	transcription start site region 40420	907 bp upstream
Tssr40421	transcription start site region 40421	961 bp upstream
Tssr40422	transcription start site region 40422	1623 bp upstream
Tssr44743	transcription start site region 44743	1701 bp upstream
Tssr44744	transcription start site region 44744	123 bp downstream
Tssr44745	transcription start site region 44745	1288 bp downstream
Tssr44746	transcription start site region 44746	1489 bp downstream
Tssr44747	transcription start site region 44747	1499 bp downstream
Tssr44748	transcription start site region 44748	1537 bp downstream
Tssr44749	transcription start site region 44749	1688 bp downstream