rs32630264 SNP Detail

Summary

• ID
  rs32630264
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:132649492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAACAGGGGA GCTGTCCCCT CCCGCGACCT CACCAGGTCG
  GAGAAGAAAC CCCAGCCGTT GCTAAGCACC AGGACACGCC GGCTGCCAGG GCCTGGACTC
  S
  GCCCGGGGCT CCCACAAGTA CCCTGCAGTC CTCTGCGGGC CCGGCTCAGC TCGTCCGCAA
  AACGGGCCGG CCACACCCTG CCCGAGGGGA CCCCGGCAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45672827	mCV24820040	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C	G
ss147479336	ENSMUSSNP601263	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		G
ss321337435	CHEV_4_132478096	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32630264					SNP	C	C	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132649492 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14977	CpG island 14977	within coordinates
Fam76a	family with sequence similarity 76, member A	Intron
Gm69717	predicted gene, 69717	within coordinates
Rr398546	regulatory region 398546	498 bp upstream
Rr601111	regulatory region 601111	within coordinates
Rr601112	regulatory region 601112	302 bp proximal
Rr601113	regulatory region 601113	321 bp proximal
Rr601114	regulatory region 601114	547 bp proximal
Tssr43726	transcription start site region 43726	1034 bp upstream
Tssr43727	transcription start site region 43727	306 bp downstream
Tssr43728	transcription start site region 43728	366 bp downstream
Tssr43729	transcription start site region 43729	409 bp downstream
Tssr43730	transcription start site region 43730	424 bp downstream
Tssr43731	transcription start site region 43731	439 bp downstream
Tssr43732	transcription start site region 43732	446 bp downstream