rs32629239 SNP Detail

Summary

• ID
  rs32629239
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135753887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCA ATCAATGGGA ACAGGATAAG
  K
  GTACAGCAAA GGTCTGCTCC TAAGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45672250	mCV22564565	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss147556126	ENSMUSSNP4105606	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T
ss321353754	CHEV_4_135582491	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32629239					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135753887 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15091	CpG island 15091	1759 bp proximal
Gm57721	predicted gene, 57721	1700 bp downstream
Gm68304	predicted gene, 68304	1149 bp downstream
Rr602242	regulatory region 602242	1053 bp distal
Rr602243	regulatory region 602243	902 bp proximal