rs32618971 SNP Detail

Summary

• ID
  rs32618971
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149653223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTAC TTTCCAGAAG GCCACCGGTA
  Y
  CCATCCTTCA GAGAAGGGTG TCAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46705656	NES11011573	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	T	T	T	T	T		T	C	T		C
ss148036208	ENSMUSSNP1326181	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						T
ss321426231	CHEV_4_148942875	CHEVERUD	SCREENING_POP	f	SNP											T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32618971					SNP	C	C	C	T	C	T	T	T	T	T	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46705656	NES11011573	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149653223 () rs orientation: forward

Symbol	Name	Function Class
Gm13066	predicted gene 13066	976 bp upstream
Gm70645	predicted gene, 70645	within coordinates
Rr604967	regulatory region 604967	1102 bp distal
Rr604968	regulatory region 604968	987 bp distal
Rr604969	regulatory region 604969	572 bp distal
Rr604970	regulatory region 604970	within coordinates
Rr604971	regulatory region 604971	728 bp proximal