rs32616159 SNP Detail

Summary

• ID
  rs32616159
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150397652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGTCTGA AGCAGCCCCA
  CATCCCACAC CTGGGATTAA AACGAAACCA TATTCTTACA TTATTTCTGT GGTTTTTTTT
  TTTTAAAGAA ACCAAAATTC CAGAATTCTC ATTATACTGC TAGGCATGGG GCCTGCCATA
  AAGAGTGGTT TGTATGTACA CTGAACCTCA TAGGAGAAAA CGAAATTTTC TTTTTTTTTA
  R
  GATTTATTTA TTTATTTATT TATTTATTAT ATGTAAGTAC ACTGTAGCTG TCTTCAGACA
  CTCCAGAAGA GGGAGTCAGA TCTCGTTACG GATGGTTGTG AGCCACCATG TGGTTGCTGG
  GATTTGAACT CCTGACCTTT GGAAGAGCAG TCGGGTGCTC TTACCCACTG AGCCATCTCA
  CCAGCCCCAA AACGAAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45671007	mCV24962010	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss148052066	ENSMUSSNP3759415	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321429001	CHEV_4_149687304	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32616159					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150397652 () rs orientation: forward

Symbol	Name	Function Class
Gm13092	predicted gene 13092	1982 bp downstream
Gm68610	predicted gene, 68610	1566 bp upstream
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605274	regulatory region 605274	1577 bp distal
Rr605275	regulatory region 605275	1341 bp distal