rs32610420 SNP Detail

Summary

• ID
  rs32610420
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149652569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAT GGGGCAGCTC TGGACTCCAG
  R
  GGACGTCAAC ACCACACTAC ACCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45670121	mCV24218224	ABI	CRAMUS_MOUSE	f	SNP	A	A						G
ss46705653	NES11011585	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	G	G	G	G	G		G	G	A	G		A
ss148036188	ENSMUSSNP1444214	ENSEMBL	ENSEMBL_Sanger	f	SNP								G
ss321426227	CHEV_4_148942221	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32610420					SNP	A	A	G	A	G	G	G	G	G	G	G	G	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46705653	NES11011585	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149652569 () rs orientation: forward

Symbol	Name	Function Class
Ctnnbip1	catenin beta interacting protein 1	1675 bp downstream
Gm13066	predicted gene 13066	322 bp upstream
Gm70645	predicted gene, 70645	within coordinates
Rr604967	regulatory region 604967	448 bp distal
Rr604968	regulatory region 604968	333 bp distal
Rr604969	regulatory region 604969	within coordinates
Rr604970	regulatory region 604970	482 bp proximal
Rr604971	regulatory region 604971	1382 bp proximal