rs32602279 SNP Detail

Summary

• ID
  rs32602279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:70319622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCCTGGC TACATGGTGA
  CGTCTTAGAA AGGGATGATG ACTTTGCTGT CTTAACTTAC GTTTTCAAAG TCCTTCATGT
  TCCGGGCTCT GGTGGGAGAA ACCTTTTCTT CTGACATGCT TGGGAGCACT ACAGAAAGGC
  AAAAGACACA AAGGAAATCA TCAGACAAGC AGGCTGCCCA GCACTCCTAC TGGGGCTGTG
  R
  GCCCAGAAGA CAAACTCATA GCAGCAATCA CGATGCCCCT GCGGGCAACT TCCTGCTTGG
  TGGTCTTTAC TGATGTGAGT CCAGAGAACT CTCTAAATTA CATTACTTTA TTCTCAATAT
  AGACAAATAG CCTACATTGG CCCCAATATA ACCACGTATG TCAAGGGATG AACCCAAAAC
  TTACACAGGA CATGTGACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45668651	mCV24157716	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32602279					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:70319622 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cdk5rap2	CDK5 regulatory subunit associated protein 2			Intron
				Noncoding-Transcript-Variant
Rr593869	regulatory region 593869			1991 bp distal
Rr593870	regulatory region 593870			492 bp proximal
Rr593871	regulatory region 593871			917 bp proximal