rs32601183 SNP Detail

Summary

• ID
  rs32601183
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135154415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGAA GCACCAAAGT CAGGGGGAAA
  Y
  GAGAACTGGA TCTGCACGGC ACGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45668556	mCV25168358	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss321352193	CHEV_4_134983019	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32601183					SNP	T	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135154415 () rs orientation: forward

Symbol	Name	Function Class
Gm69999	predicted gene, 69999	within coordinates
Rcan3	regulator of calcineurin 3	Intron
Rr367746	regulatory region 367746	258 bp downstream
Rr602028	regulatory region 602028	1131 bp distal
Rr602029	regulatory region 602029	within coordinates
Tssr43990	transcription start site region 43990	1608 bp downstream