rs32594271 SNP Detail

Summary

• ID
  rs32594271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150113908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGTT TGAAATATTT TTTCTTTTTA
  R
  CGACAATACA AAAGCAGGTG CTTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45667755	mCV24999727	ABI	CRAMUS_MOUSE	f	SNP	G	G	A		G	A
ss46710819	NES11013243	PERLEGEN	MM_PANEL2	f	SNP	G		A	G		A	A	G		A	G	G		A
ss148045639	ENSMUSSNP5227211	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A			A
ss321427685	CHEV_4_149403560	CHEVERUD	SCREENING_POP	f	SNP									G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32594271					SNP	G	G	A	G	G	A	A	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46710819	NES11013243	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150113908 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15342	CpG island 15342	1116 bp proximal
Gm70249	predicted gene, 70249	366 bp upstream
Rr605147	regulatory region 605147	within coordinates
Rr605148	regulatory region 605148	377 bp proximal
Tssr40361	transcription start site region 40361	388 bp upstream