rs32594061 SNP Detail

Summary

• ID
  rs32594061
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94445765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTAGCGCA CGCCTTTAAT
  CCCAGGACTT GGTAGGCAGA AGCAGGCGGA TTTCTGAGTT CAAGGCCAGC TTGGTTTACA
  AAGTGAGTTC CAGGACAGCC AAGGCTACAC AGAGAAACCC TGTCTACAAA AACAAAAACA
  AAAGAAAAAA GAAAGCAAGA AACAGATAGC CCTGGCCATG TTCAGCCTTC TTTCTTCCCT
  R
  TGAACTCTTA CAGATGCCTC TGGCTGTTCT CTCTACAATA AAAACCTTTT TACCTATACC
  ATGGAGCGGT CGAATCAGTT TAGTCACAGA TAGATACACA GTGGGGCAAG GAATGGCTGG
  CTGTTCCTGG AGGCTAAAAT AGCCCACGAT GAAGTAATTA GCCTGTGAAC TTACAAAATT
  CCAACCTCTT CACAGTACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45668238	mCV23923000	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss147049638	ENSMUSSNP6605263	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			G
ss321211513	CHEV_4_94224219	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32594061					SNP	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94445765 () rs orientation: forward

Symbol	Name	Function Class
Caap1	caspase activity and apoptosis inhibitor 1	732 bp upstream
Gm10306	predicted gene 10306	450 bp downstream
Rr595335	regulatory region 595335	242 bp distal
Rr595336	regulatory region 595336	1004 bp proximal
Rr595337	regulatory region 595337	1942 bp proximal
Tssr42442	transcription start site region 42442	726 bp upstream