rs32590141 SNP Detail

Summary

• ID
  rs32590141
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149313998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAGCCAT CTATCTCTCC
  AATCTCCAGT CATTCTGTAT TCCTACTAAC AACCTGATGC TGCAGATACA GAGCTCAGTA
  AGGAAAAGGT CACGTCAGCA TGGGCAGAGA GATGACAAGC ATGGCACGCA CTAGGTTTTG
  GTAGAGAGAA ACAATCTGAA GAGTGTAAAG CAAAGCAGAA GACAGATGAG GGTCACCAGG
  K
  AGACAAGGAG GAGTGAGAGA TACTAACGTG AAACTGACAG CGGCCAAGAG ACAGCTGAGG
  TGTTCTGGTT CCTTAAAGCA CCTGTTAGGA CTTTATAGCA CCCTGTATTT TTTTCTCTTA
  GCCTGTCACA CAGTATTGAT AAAACACCAG TGTGGTTATC TGCCCAGTGG CAGCTTCTCC
  ATAATTTTGA CTTTCACGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46701492	NES10942614	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	T	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32590141					SNP	G	G	G	T	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46701492	NES10942614	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149313998 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604865	regulatory region 604865	651 bp distal