rs32587121 SNP Detail

Summary

• ID
  rs32587121
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149301962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGAAAGCA AGCCATCTAA
  CTTTACACTA GGATGATTTT TCAAGAGTAA AGTTATGATG GAAATTAACT ACACCGAGCA
  CTTAGCATTT CTGCCATTCC TTAATTTTAC TATGTTAAGT ATAATTATCA GGGAAAATAA
  AAGCACTGTT ATGCCTATGT TTTGCAGGAC CTTGACAGGT CAGGCAGTGC CATCAGCCCA
  W
  GGATTATGAG TTTTTAAGAA CACACATCCA CAGGCATATC ATCATATCAT CATACAAATA
  ATGCTGGACC GCACACTAAA GGGGAGGAAG CCTGCTACCC ATGGCAAAGG CTTCCCATAC
  CCAGCAGCAC TGAAGGCATT ACTGGACACT TCCAACTTTA GGGACGAGTC TATGGCAAGG
  CAGAGGCACC CGGCCTGTGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45708902	mCV23443606	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss46701258	NES10942991	PERLEGEN	MM_PANEL2	f	SNP	T		A	A	A	T	A	A	A	A	A	A	A	A	A	A
ss148029686	ENSMUSSNP3993398	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32587121					SNP	T	T	A	A	A	T	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46701258	NES10942991	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149301962 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604862	regulatory region 604862	1720 bp distal
Rr604863	regulatory region 604863	1161 bp distal