rs32586817 SNP Detail

Summary

• ID
  rs32586817
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148992554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAC AGGAGACTGG AGGAGCCAGG
  M
  TGAGCCTCCT GGGACAGGGA TCCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45666918	mCV24952396	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	A
ss148022764	ENSMUSSNP6267810	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		A
ss321423672	CHEV_4_148282206	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32586817					SNP	C	C	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148992554 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr604793	regulatory region 604793	878 bp distal
Rr604794	regulatory region 604794	within coordinates
Rr604795	regulatory region 604795	182 bp proximal