rs32585825 SNP Detail

Summary

• ID
  rs32585825
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT TTCCATTTGT CATTCTCTGG
  R
  CTCGAAACAT GCTTAAGCGT GTAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	SM/J	WSB/EiJ
ss45666575	mCV24222020	ABI	CRAMUS_MOUSE	f	SNP	G			G		A
ss46712307	NES11002255	PERLEGEN	MM_PANEL2	f	SNP		G	G		A		G			A
ss148049577	ENSMUSSNP3888255	ENSEMBL	ENSEMBL_Sanger	f	SNP	G					A
ss321428586	CHEV_4_149560113	CHEVERUD	SCREENING_POP	f	SNP								A	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	SM/J	WSB/EiJ
rs32585825					SNP	G	G	G	G	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712307	NES11002255	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270461 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	1011 bp downstream
Rr605217	regulatory region 605217	509 bp proximal
Rr605218	regulatory region 605218	716 bp proximal
Tssr40380	transcription start site region 40380	1412 bp upstream
Tssr40381	transcription start site region 40381	1421 bp upstream
Tssr40382	transcription start site region 40382	1439 bp upstream
Tssr40383	transcription start site region 40383	1453 bp upstream
Tssr44720	transcription start site region 44720	1386 bp downstream