rs32584880 SNP Detail

Summary

• ID
  rs32584880
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149258254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCCTCCT ACAAGCTGTC
  CTCCCACTTC CCACACGAAC ACCACATGTG AACACCACAC ACACACACAC ACACACACAC
  ACGGAAATGT AATTTAAAAA CAGACTGATG TGGCCTCCAT CTACCTTTCT CTTTTCCCAG
  TTGACTCTGA AATAGGGCGA GATAAGGATA GGACTTGAGG GGCTCCCTCA AACTCCGTAC
  Y
  ACCTCCTGTT GCCCAACACT GTGGTCATTG CTCAGGCTTT ATTTTTGGTC TATCCGTCTT
  ACGGGAGTAG CAACTGAGCC CTTCCTCTTT AGTATGTTCT TACTCTGGTG GCCAAGTGCC
  ACTTAGAGAG CAACAAGGTC ATTCCCCTTC CTCTCCGTGG GACCTTCATG TATTGAGGTC
  CCTCTTCCTG ATCTCTATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46700745	NES10944279	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32584880					SNP	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46700745	NES10944279	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149258254 () rs orientation: forward

Symbol	Name	Function Class
Rr604853	regulatory region 604853	1753 bp distal
Rr604854	regulatory region 604854	1421 bp distal
Rr604855	regulatory region 604855	788 bp distal