rs32583280 SNP Detail

Summary

• ID
  rs32583280
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:43888876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTGGTAG CACTCAGTTG
  GGTGATGTCA TCTCTCTCTG TGGCTATTTC GTCTTTGACT TTGAAATCAC ACTCAAGGGG
  ACCCTCTGCT CTGCCCAGTA CTCTATCAGG AACTCCAGCT GACCAATTTT CTGTCTGTCT
  GTCTGTCTGT CTGTCTATAT CTAGCTATCT CTCTATCTGT TTATCTATCA TCTACCTATC
  W
  TTTGCTATTT AACCTTTAAC CTCTGCTTGC TTTATAATTC ATAGACTCAT TCATTCACCA
  CTAAAAGTGT AGTTGTTGGA GATGATTTTC CTGACCATAC ACAACAGCAC ATAAATGAGC
  CAGGCCCGGT TACATGGGCA CTTAGATCCC AGTGCTGCAG ACTAAGATAA ATGGATCCCT
  GAAGGTTGAT GACCAGACAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss47685330	NES11333869	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A		A	A	A		T
ss322939856	CHEV_9_43785662	CHEVERUD	SCREENING_POP	f	SNP							A				T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32583280					SNP	A	A	A	A	A	A	A	A	A	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47685330	NES11333869	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:43888876 () rs orientation: forward

Symbol	Name	Function Class
Gm10688	predicted gene 10688	1379 bp downstream