rs32577958 SNP Detail

Summary

• ID
  rs32577958
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156444658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAC ACTGACACTG AATTGGGCGC
  R
  GTACGTCTGA CTCATAGGGC TTGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45164882	mCV23342401	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145800301	ENSMUSSNP5913438	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320072530	CHEV_1_158547219	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32577958					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156444658 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr396425	regulatory region 396425	1180 bp downstream
Rr421203	regulatory region 421203	675 bp distal
Rr421204	regulatory region 421204	1427 bp distal
Rr421205	regulatory region 421205	within coordinates
Tssr9572	transcription start site region 9572	1226 bp downstream
Tssr9573	transcription start site region 9573	1202 bp downstream
Tssr9574	transcription start site region 9574	1155 bp downstream