rs32577499 SNP Detail

Summary

• ID
  rs32577499
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149131556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGATCTA TAGTTCACAG TGTTTGGCTC TCTATTCTTT
  CTCAATTCTT CACTCTTTCA GTTAGGACAC AGGCTAGGAA GGGAAGGAAG CAGGGGCAAA
  M
  GCAAGTCACA TTCCAAGACA CTGTAGGAAC ACATCTAAAA GATGACACAC CTCAAGTCAA
  AGCAGAAGCA AAGTCTGTGA GCCTGCAAAA GAAAGGGAAT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	KK/HlJ	PWD/PhJ	WSB/EiJ
ss46699545	NES10947744	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	KK/HlJ	PWD/PhJ	WSB/EiJ
rs32577499					SNP	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46699545	NES10947744	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149131556 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pex14	peroxisomal biogenesis factor 14			Intron
				Noncoding-Transcript-Variant
Rr604817	regulatory region 604817			802 bp distal
Rr604818	regulatory region 604818			232 bp proximal
Rr604819	regulatory region 604819			499 bp proximal
Rr604820	regulatory region 604820			1696 bp proximal