rs32577496 SNP Detail

Summary

• ID
  rs32577496
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149131436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGACAAAT ACGGTCATCC
  GTGGCACAAG GAAATAGTTG CAAAGCAGCT GTTAATCAGA GAAACACATC GGAGAACGCT
  GATGCTAGCA CTCGTGAAAA AATGCAACGG GCTAATTATG AAGCCATATA TCTCACTAAA
  GAGGCTGTGT GCCTTGAGAT TCTAGGCAAC GCACACTCAG ATCCAGGGTC CTAGGACAAC
  R
  TAATTCTGGT TTTCTGCATC TCTGATCTAT AGTTCACAGT GTTTGGCTCT CTATTCTTTC
  TCAATTCTTC ACTCTTTCAG TTAGGACACA GGCTAGGAAG GGAAGGAAGC AGGGGCAAAC
  GCAAGTCACA TTCCAAGACA CTGTAGGAAC ACATCTAAAA GATGACACAC CTCAAGTCAA
  AGCAGAAGCA AAGTCTGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	KK/HlJ	WSB/EiJ
ss46699542	NES10947743	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	KK/HlJ	WSB/EiJ
rs32577496					SNP	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46699542	NES10947743	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149131436 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pex14	peroxisomal biogenesis factor 14			Intron
				Noncoding-Transcript-Variant
Rr604817	regulatory region 604817			682 bp distal
Rr604818	regulatory region 604818			352 bp proximal
Rr604819	regulatory region 604819			619 bp proximal
Rr604820	regulatory region 604820			1816 bp proximal