rs32575248 SNP Detail

Summary

• ID
  rs32575248
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149067370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAT GCCCAGCCTC GGCCTGGCCC
  R
  CTCTAGCTGA CCACAGGAGA GCATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45722644	mCV22665284	ABI	CRAMUS_MOUSE	f	SNP	G	G				A		G
ss46699005	NES10929701	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G		G	G	A	G		G	G	G		G
ss148024601	ENSMUSSNP2232069	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
ss321424106	CHEV_4_148357022	CHEVERUD	SCREENING_POP	f	SNP											G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32575248					SNP	G	G	G	G	G	A	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46699005	NES10929701	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149067370 () rs orientation: forward

Symbol	Name	Function Class
Pex14	peroxisomal biogenesis factor 14	Intron
Rr1858	regulatory region 1858	1821 bp upstream
Rr604813	regulatory region 604813	389 bp distal
Rr604814	regulatory region 604814	1823 bp proximal
Rr604815	regulatory region 604815	1983 bp proximal