rs32573672 SNP Detail

Summary

• ID
  rs32573672
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156445047 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTA AGAGTCAGAG ACAGGAGGGG
  Y
  GGCCAGGCCA GGGAACGGAA AGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45164349	mCV23342394	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss145800309	ENSMUSSNP57892	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32573672					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156445047 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr396425	regulatory region 396425	1569 bp downstream
Rr421203	regulatory region 421203	1064 bp distal
Rr421204	regulatory region 421204	1816 bp distal
Rr421205	regulatory region 421205	within coordinates
Tssr9572	transcription start site region 9572	1615 bp downstream
Tssr9573	transcription start site region 9573	1591 bp downstream
Tssr9574	transcription start site region 9574	1544 bp downstream