rs32556431 SNP Detail

Summary

• ID
  rs32556431
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139515545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATGCACA CAACATACAT
  GCACACATAC ATGCACTCCA ACATACATGC ACAACAACAT GCACACAGTC TCAGGAGACA
  ATAGCCGTGT CTGTGGATGG GGCTTCTCAT CCTGCCAGGC CAGCACATCC TTGACTGTGA
  TACAGACGGT GCCTGTCACA AAGCAGGTAC ATAGGGTGTC GGCACCGATC CTCGATCCTC
  R
  CAGCCTGGAG AGTGGTCTTA AGTGCCCATC TCCATGCTCA GGAGCAGCCG ACCCTTCACA
  CTGCCAACAG GAAACCATTG TTCCCACTGG TTGGAACGCC AGAAGGCCAA GGTTGGCCCG
  TTTGACTGGT GCCCAGTGGA GCGCTTGAGC AAGGGGCTGC AAGGAACCCT GGCTCCACAC
  CTGGTGTAGA CACCTGACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45662267	mCV25307609	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss147681584	ENSMUSSNP3683301	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss321384500	CHEV_4_139344149	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32556431					SNP	G	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139515545 () rs orientation: forward

Symbol	Name	Function Class
Pax7	paired box 7	Intron
Rr603302	regulatory region 603302	1642 bp proximal
Rr603303	regulatory region 603303	1731 bp proximal