rs32554600 SNP Detail

Summary

• ID
  rs32554600
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:8684382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCAAGTTGAC ACAAAACTAG CCAGTACAGA GACAGAGTCT AAAGTAGCCC AGGCTGGCCT
  CAAACTCATT ATGTAGTTAA CAATGGCAGA ACTCCTGAAG CCCTAGCTTC CACCTTCTGA
  GTGCTAGGAT TACAGGCATG AGCCACCACA CACAGTTTAA GCAGTGTGGA GCGTTGAACC
  CAGGGTTCCT TATGCTAGGA AAGCACTCTG CCAAGTGCCC TACACATCCC AGCCCCATGG
  TTTTCTTGCT GTTTGCTTTT GTTTCTTTAT TTTGTAGCAT TGAAAATTGA ACTGTGTGGT
  Y
  TTCTGCACGC TAGGCAAACA TTCGACTACT GAAGTATACT CATAGCCTTT TGGTGTTTTG
  AAACAGGGTC CTGTTATATA GTCCAGGTTG GTTTTGAACT TACAATGCTT TTGCCTCCAT
  ATCCTACAGA GTTATGCGGT TACACTCAGC TAAAAAAAAA AAAAAAAAAA AAAAAAACCT
  CACTGTGCTA TAAACCCTTT CTGATCTGGC CTACATTTTA TTTCTATCTT CACTTCCCTC
  CCTGTGTGTG CTGTACTCTA ACTGAGCCAA ATTACTTGCG GTCCTGACAC AGGCCATCTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45661878	mCV23779853	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs32554600					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8684382 () rs orientation: forward

Symbol	Name	Function Class
Rr588556	regulatory region 588556	227 bp proximal
Rr588557	regulatory region 588557	779 bp proximal