rs32551926 SNP Detail

Summary

• ID
  rs32551926
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32096202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGTGTTGC AAATAAATGC
  TAAGAAAAAT CTTTAAGGTA AATTTGTTGT AATTTCTTCT TTTAGCACTA AGAACTTTAG
  AAAGCTTTGT TAGGAGAAGG GTAGCCTAAA GAATACTGAA AGAATAATTA CAAAAATTCC
  TGTTCGGATC TTGGTTTAGA GAGTTACTTG AGTAAGCAAG ATTCTGCAGC CTACAGTAGC
  M
  GAGCGACCAA AAGCGGGAGG AGTTGCTACT AGCAGGCTAG GCGGGAACGC AGACGCAGCT
  CCCGGAAGTC CCGCCCGACT GAGCGGTTCC TTGGGGGAAG ACGTGCCGTT TTGGCGGGGA
  ATTGTGACGT CCGTGGAGCC CGGGTACCTG CTCCGGCCGC GGCCAGTAGA CCGATTGGCA
  GGACAGCGGG TGCGAGCGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss48179940	NES12101340	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	A	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs32551926					SNP	C	C	C	C	C	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48179940	NES12101340	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32096202 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8187	CpG island 8187	within coordinates
Rnf168	ring finger protein 168	75 bp upstream
Rr514674	regulatory region 514674	1260 bp distal
Rr514675	regulatory region 514675	within coordinates
Tssr137960	transcription start site region 137960	65 bp upstream
Tssr137961	transcription start site region 137961	95 bp upstream
Tssr137962	transcription start site region 137962	144 bp upstream
Tssr137963	transcription start site region 137963	264 bp upstream