rs32551030 SNP Detail

Summary

• ID
  rs32551030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135671836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAACCAT CTGTAATGGG
  ATCTGATGCC TTCTTCTGGT GTCTCTGAAT ACAGCTACAG TGCACAATTA AAACAAGAGT
  CCCATGTAGC TCAGGCTGTC CTCAAATTTA CCATGTAGCT GAGGCTAGCC TTGAACTCCT
  AATCTTCCTG CATTTAGCTC CTAAGTGCTG ATATTGCATG CTTACACTCT GAGCAGGGGG
  Y
  TTATAAAGGG GAAAGGCACA ACTTTGGTAC TTCTCATTGA TGTAGCTGTG ATGGCTGTTA
  GCAAGCATGA CAGGATATGA ACTTTTAGTA AGAATAAGGA GGCAGGTGGG TTTCTGAGTT
  TGAGGCCAGC CTGGTCTACA GAGTGAGTTC CAGGACAGCC AGGGCTATAC AGAGAAACCC
  TGTCTGGGGA AAAAAAAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45662397	mCV22566134	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32551030					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135671836 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15085	CpG island 15085	1750 bp proximal
Gm69275	predicted gene, 69275	1514 bp downstream
Hmgcl	3-hydroxy-3-methylglutaryl-Coenzyme A lyase	1940 bp upstream
Rr602208	regulatory region 602208	1963 bp distal
Rr602209	regulatory region 602209	702 bp distal
Rr602210	regulatory region 602210	647 bp distal
Rr602211	regulatory region 602211	1131 bp proximal
Rr602212	regulatory region 602212	1842 bp proximal
Rr602213	regulatory region 602213	1934 bp proximal
Tssr39660	transcription start site region 39660	1922 bp upstream
Tssr44007	transcription start site region 44007	1840 bp downstream