rs32545972 SNP Detail

Summary

• ID
  rs32545972
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152071221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT CCAGGCCTGG GTGAACACAA
  R
  TTTGATGCGT TAGGTGTCAA GTTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45660557	mCV24830049	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32545972					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152071221 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15381	CpG island 15381	1522 bp proximal
Rr605696	regulatory region 605696	228 bp distal
Rr605697	regulatory region 605697	673 bp distal
Rr605698	regulatory region 605698	within coordinates
Rr605699	regulatory region 605699	1244 bp proximal
Rr605700	regulatory region 605700	1827 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Intron