rs32537096 SNP Detail

Summary

• ID
  rs32537096
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150279003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTTGTTG TTGTTTTCCC
  CCGTGTTTAG GTTTGAGTTT ATTTTGGTTC AGTTTTGGTG GGGTTTTTTT TTGTTTTGTT
  TTTTTGAGAC AGGGTTTCTC TATGTATAGT CCTTGCTGTC CTGGAACTCA CTATGTAGAC
  CAGGCTGACC TTAAACATGA GAGACCTGCC TTTCTTTGCC TCCTAAGTGC TGGGACTAAA
  R
  GTGTGCACCA CCACTGACTG GCTTGGTTTT GTGTTTTTAA GACATGGTCT TATTGTGTAG
  CTTGGGCTGG TCTAGAACTC CCTACATGGG TCATGCTGGC CTCGGATTTG CTGCAATCTG
  ATACTGTTCC CAAGTGCTGG GGTTACAGGT TTGCACCTCT ATGATAGATT CCTGGAGTCT
  GTTCTGTTGG GCTTTTTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45660331	mCV24961217	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148049922	ENSMUSSNP448016	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32537096					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150279003 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Car6	carbonic anhydrase 6			Intron
				Noncoding-Transcript-Variant
Rr605219	regulatory region 605219			327 bp distal
Rr605220	regulatory region 605220			413 bp distal
Tssr40386	transcription start site region 40386			1548 bp upstream
Tssr44725	transcription start site region 44725			1988 bp upstream
Tssr44726	transcription start site region 44726			1961 bp upstream
Tssr44727	transcription start site region 44727			1913 bp upstream
Tssr44728	transcription start site region 44728			771 bp upstream
Tssr44729	transcription start site region 44729			1533 bp downstream
Tssr44730	transcription start site region 44730			1563 bp downstream
Tssr44731	transcription start site region 44731			1596 bp downstream