rs32522769 SNP Detail

Summary

• ID
  rs32522769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6215274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTCTATTA ATCTAAGTTC
  ATCTTACTTT CTCGTTATTT GTTTGTTGTT GCTGTTGTTG TTGAAGACAG GGTTTTTTAG
  TTTAACAGCT CGTGTCTATC CTGGAATTCA CTTTATAGAG CAAGCTGGCC CCTGCCTCCA
  ATGCACTGGG ATTAAACCTG TGTGCCACAA TGCCCAGCTT CTCCTTACCT TCTCTTTATC
  Y
  TGACTTTCTC ATCCACTTAC AGTTGGTTTT GTTATATCCT ATTGGAAGGT ATTCTATATC
  TATATATGTC AGCCATCCGA ACTGAAGAGA GGTGACTGTC AGTGAATAAA TAACAAAGAA
  GGCAGGTTTC AAAGGGTAAA GGTGACAGGA ATGTTTCAGT TTCCTTGGCC TCCTGATTTG
  GATAAAAACC AACTCTCCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321731368	CHEV_6_6165274	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32522769					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6215274 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17135	CpG island 17135	1386 bp proximal
Rr378879	regulatory region 378879	1815 bp downstream
Rr626225	regulatory region 626225	928 bp proximal
Rr626226	regulatory region 626226	1834 bp proximal
Slc25a13	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	Intron
Tssr59765	transcription start site region 59765	76 bp downstream
Tssr59766	transcription start site region 59766	1749 bp downstream
Tssr59767	transcription start site region 59767	1854 bp downstream