rs32522409 SNP Detail

Summary

• ID
  rs32522409
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6288113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATGTTCT GTTGTTTATG
  ATGGAGAAAT GAGTTTGAAT GGAAGCAGAA CTGGTTGCTC TAGCACTATT GTGTGGGCTG
  TCCTAGCAAT TGTTGCTCCC TGTCTCCACT CCACCTCTTA CCCTCTGCCT GCACCAGAGC
  ACAGCTTTAC CCTGCATCCA GAGAGCATAA ATTACAGCCA CAGGTCTTGT GCTGCTGGGA
  W
  AAGAGCCCAC TTTCCCGAGC TACATGCTCA GCTTCTGGTA AATCTTTTTC CTGATTAGTA
  TATTTCAACT ACTAAGATAA GGCTAAGAAA GAGCCCATAA ACCCAGTTTA CCTAGAATGA
  AAAAAATATT GAGACGCAGG CTTACTGTGT AGTCATGGCT AGCCTAGAAC CTGTGAGCTC
  CCAGCTGCGT TTTCCCAAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321731633	CHEV_6_6238113	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32522409					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6288113 () rs orientation: forward

Symbol	Name	Function Class
Gm20619	predicted gene 20619	within coordinates
Rr626230	regulatory region 626230	1663 bp proximal
Rr626231	regulatory region 626231	1896 bp proximal