rs32521917 SNP Detail

Summary

• ID
  rs32521917
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:59810343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCA AGGGGCAGCG TGGGGCCACT
  Y
  GGATGGCTGA GAGCTTGCCT AGCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45658302	mCV22954116	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss146403220	ENSMUSSNP3000405	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321141410	CHEV_4_59823215	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32521917					SNP	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59810343 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr593144	regulatory region 593144			1644 bp distal
Rr593145	regulatory region 593145			1751 bp distal
Snx30	sorting nexin family member 30			Intron
				Noncoding-Transcript-Variant