rs32518045 SNP Detail

Summary

• ID
  rs32518045
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135665223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGAAATT ACTTATATCA
  ACTTAGAAAT CCTGCAAAAT CATTAGGAAT TATGGAGTCA TTAATTCGTC TGTCCAGCAT
  TACTATGTGA AAGTACATCT TCATGTTGGC CTGCAGAAAG TCTGCCCAAA TAGGGTGGGA
  TAATGCCCAG GAGTCCTTAG GCTGTGTAAT AGTGACAGGA AAGCGTATCA GCAGAGAGAC
  S
  CAATCCCGGG ATGAAGTCTC TAAGGACCCT GCCTGCTTGG AGCCCACCCG TTGCTGGCCG
  TGCAGAATGA CAAGCTAGCT CCAGGAGACA CTTGCCAGCC TTTCGCCTTT CCTACATGGC
  TCCCTGCACC CTCCTAAGGT TTAGCATGTT CTGGTTTTGT TTTTCATTTT TTTATTGCTG
  GGGATAGACC TCAGGGCCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45657278	mCV22566166	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss147554385	ENSMUSSNP6450555	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		C
ss321353518	CHEV_4_135493827	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32518045					SNP	G	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135665223 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fuca1	fucosidase, alpha-L- 1, tissue			Intron
				Noncoding-Transcript-Variant
Rr602205	regulatory region 602205			1203 bp proximal
Rr602206	regulatory region 602206			1237 bp proximal