rs32510024 SNP Detail

Summary

• ID
  rs32510024
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150279839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGATGTGT CTATTTGTGG
  GCTTGTTTAG GTGTTCGCCC GTGTTTAACC TGCAGAATGT GCCTCCGTGG CAGCACAGAG
  CAGTTAATGT CGCTGCTAAG ATTGATGCTT CTAGATTTTA AATTTTACTT ATTTATCTAT
  TTATGTTATA TGAAAACAAC TGGGTATTTC ATTTTGCTTA TAACTTTATC CAGCTTTTAC
  R
  TAAAGTTTTT GAGAATTAGA GTCCTGTCTA CTTTGAATTT GTTTTTTAGT CTTATTTGCT
  TCTATTTTCT ATGTATGTGT GTTTTTATCT GCACATATGT CGGTGTACCA TGTGCAAGCC
  TGGTGCCCTC AGAGGCCAGT GGGTCTCCTG GAACTGGTGG TGAACTACCA TGGGAGTGCT
  GAGCCTAGAA CCTGGGGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45657123	mCV24961240	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss148049955	ENSMUSSNP4911314	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32510024					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150279839 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Car6	carbonic anhydrase 6			Intron
				Noncoding-Transcript-Variant
Rr605219	regulatory region 605219			1163 bp distal
Rr605220	regulatory region 605220			1249 bp distal
Tssr40386	transcription start site region 40386			712 bp upstream
Tssr40387	transcription start site region 40387			1928 bp upstream
Tssr44728	transcription start site region 44728			1607 bp upstream
Tssr44729	transcription start site region 44729			697 bp downstream
Tssr44730	transcription start site region 44730			727 bp downstream
Tssr44731	transcription start site region 44731			760 bp downstream
Tssr44732	transcription start site region 44732			1973 bp downstream
Tssr44733	transcription start site region 44733			1980 bp downstream