rs32509970 SNP Detail

Summary

• ID
  rs32509970
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150205655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGGAAAGTG CCTGAAACGG
  GGCTGGTGAG TATGGTTCTG CTCGTAGAGT ACTTACCATG GGTCCAGAAA GTCCAAGGTG
  AAGCAGGTAT GGCTCACGCT TGTGCCTTAG CCCTTGGGAG GTAGAGGTGG GAGATGAGGA
  GTTTGAGGTT AATCTCAGCC ACAAAGGGAG TTCAAAGCCA GCCTAGGATA AAGACCCTGT
  Y
  TGTCAAAAAA AAAAAAAAAT TTTTTTTTCC TTTCTCTTCC AAACTCACAG TGTAAGTAGG
  GATTAGGTGT AGATTTCCTT GGTTGAGAAA AATTTCCAGC GCCAAGAAGG TAACATGAGC
  TGGGCAGTGG TAGCGCACGC CTTTAGTCCC AGCACTTGGG AGGCAGAGGC AGGTGGATTT
  CTGAGTTCAG GGCCAGCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45656674	mCV24960465	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32509970					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150205655 () rs orientation: forward

Symbol	Name	Function Class
Gm13093	predicted gene 13093	1935 bp upstream
Rr605186	regulatory region 605186	1946 bp distal
Rr605187	regulatory region 605187	1905 bp distal
Rr605188	regulatory region 605188	1706 bp distal
Rr605189	regulatory region 605189	225 bp distal
Rr605190	regulatory region 605190	895 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40372	transcription start site region 40372	1867 bp downstream
Tssr40373	transcription start site region 40373	1849 bp downstream
Tssr40374	transcription start site region 40374	493 bp downstream